Alternative Algorithm of Protein Based on OpenCL
XU Peiyan
SHI Huibin
Abstract：In order to accelerate the alternative algorithm of protein ,this thesis proposes the alternative algorithm of protein based on OpenCL .Through researching the potential parallel of Cartesian product ,this thesis firstly realizes the al-ternative algorithm of protein on CPU ,then realizes parallel alternative algorithm of protein on GPU .Test results show that the average speedup of using GPU is 1 .42x .
Keywords：proteinalternative algorithmCartesian productOpenCL
Publication Date：2016-01-01
Online Publishing Date：2025-08-15(First online date of this platform, not the publication date of the document)
Pages：4( 1420-1422,1435 )